
Upstream Bioprocessing: Seven Hot Topics for the Next 24 Months
Upstream bioprocessing is changing quickly. The industry faces pressure to scale up faster, remain flexible, and lower costs, all while keeping product quality high. Here are seven key developments shaping the upstream landscape, each supported by clear evidence. This is the beginning of a series of articles where we will focus on each of these hot topics in more detail.
Scaling Through Continuous Perfusion
Continuous perfusion systems are gaining traction. By 2025, 38.8% of biomanufacturing facilities plan to assess continuous upstream processing for better productivity and consistency [1].
Single-Use Bioreactor and Equipment Surge
The market for single-use upstream equipment is growing rapidly. Projections show it will rise from $10.8 billion in 2025 to $36.2 billion by 2035, encouraging the use of flexible, scalable systems [2].
Intensified Cell Culture and Seed-Train Strategies
Upstream intensification, which involves increasing cell densities and feed rates, is advancing. Real-time Process Analytical Technology (PAT), including inline Raman analyzers, is being incorporated to maintain quality and stability in these intense cultures [3].
Digital and Smart Bioprocessing
Digital biomanufacturing is on the rise. Analytics, automation, and AI are changing control systems. The digital upstream market is anticipated to approach $40 billion, integrating real-time control and predictive monitoring [4].
Emerging Markets and CDMO Outsourcing
The Asia-Pacific region is the fastest-growing upstream market, driven by local biopharma investments. By 2025, it is expected that CDMOs will manage 44% of global mammalian capacity, as companies look to outsource for flexibility and specialized resources [5].
Machine Learning over Sparse Data
With upstream experiments only producing limited datasets, machine learning tailored for small data environments is becoming more popular. A 2025 review highlights methods designed for low-data upstream cases, making AI a more feasible option for bioprocessing innovation [6].
Optimization via Continuous Modeling
Process modeling, including dynamic modeling for perfusion bioreactors, has shown the potential to boost monoclonal antibody yield by over 44 to 52%, depending on feed strategies and sampling frequency [7].
What This Means for You
- Start implementing continuous perfusion systems now—not just in theory but in actual adoption—to show their real value [1].
- Invest in single-use platforms to achieve agility and scale without heavy capital expenditure or cleanroom challenges [2].
- Add real-time PAT to manage intensified cultures and maintain control over Critical Process Parameters (CPPs) and Critical Quality Attributes (CQAs) [3].
- Emphasize digital integration: leverage automation and AI for monitoring, detecting deviations, and enhancing control [4][6].
- Consider partnerships in Asia-Pacific or with CDMOs to gain access to capacity without substantial investments [5].
- Use machine learning tools prepared for small datasets to reliably speed up upstream optimization [6].
- Develop predictive models to improve perfusion strategies, thereby increasing yield per reactor volume [7].
Please watch for our follow up articles in this series where we dive into each of these hot topics in more detail.
Footnotes
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1. “Report: Nearly 40 % of Biomanufacturers Eyeing Continuous Processing in 2025.” Bioprocess Online, 19 Aug. 2025.
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2. “Upstream Bioprocessing Equipment Market Size & Trends 2025 to 2035.” Future Market Insights, 30 June 2025.
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3. “Upstream Bioprocessing: More Intense and More Stable.” Genetic Engineering & Biotechnology News, 1 June 2024.
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4. The Bioprocess Revolution: How Technology and Trends Are Reshaping Pharmaceutical Manufacturing.” American Pharmaceutical Review, 17 Mar. 2025.
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5. “Upstream Bioprocessing Global Market Report 2025.” The Business Research Company, 2025.
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6. Peng, Johnny, et al. “Machine Learning Methods for Small Data and Upstream Bioprocessing Applications: A Comprehensive Review.” arXiv, 14 June 2025.
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7. Kaysfeld, Morten Wahlgreen, et al. “Dynamic Optimization for Monoclonal Antibody Production.” arXiv, 20 Feb. 2023.